Publications

32. Davulcu, O., Flynn, P.F., Chapman, M.S., and Skalicky, J.J. (2009) Intrinsic Domain and Loop Dynamics Commensurate with Catalytic Turnover in an Induced-Fit Enzyme. Structure17, 1356-1367.

31. Van Horn, W.D., Ogilvie, M.E., and Flynn, P.F. (2009) Reverse micelle encapsulation as a model for intracellular crowding. J. Am. Chem. Soc.131, 8030-8039.

30. Workman, H., and Flynn, P.F. (2009) Stabilization of RNA oligomers though reverse micelle encapsulation. J. Am. Chem. Soc.131, 3806-3807.

29. Workman, H., Skalicky, J.J. and Flynn, P.F. (2008) 1H, 13C, and 15N Backbone and Side Chain Resonance Assignments for the RNA-binding protein Snu13p from Saccharomyces cerevisiae. J. Biomol. Assign.2, 1-3.

28. Van Horn, W.D., Ogilvie, M.E., and Flynn, P.F. (2008) Use of reverse micelles in membrane protein structural biology. J. Biomol. NMR40, 203-211.

27. Soss, S.E. and Flynn, P.F. (2007) Functional Implications for a Prototypical K-turn Binding Protein from Structural and Dynamical Studies of 15.5K. Biochemistry46, 14979-14986.

26. Soss, S.E. and Flynn, P.F. (2007) NMR assignment of the human spliceosomal 15.5K protein. J. Biomol. NMR.38, 175.

25. Simorellis, A.K. and Flynn, P.F. (2006) Fast local motion dynamics of encapsulated ubiquitin. J. Am. Chem. Soc.128, 9850-9851.

24. Simorellis, A.K., Van Horn, W.D. and Flynn, P.F. (2006) Dynamics of Low Temperature Induced Water Shedding from AOT Reverse Micelles. J. Am. Chem. Soc.128, 5082-5090.

23. Ramachandran, S., Flynn, P.F., Tseng, Y. and Yu, Y.B. (2005) Electrostatically controlled hydrogelation of oligopeptides and protein entrapment. Chem. Mater.17, 6582-6588.

22. Van Horn, W.D., Simorellis, A.K. and Flynn, P.F. (2005) Low temperature studies of encapsulated Macromolecules. J. Am. Chem. Soc.127, 13553-13560.

21. Simorellis, A.K. and Flynn, P.F. (2004) A PFG NMR experiment for translational diffusion measurements in low-viscosity solvents containing multiple resonances. J. Magn. Reson.170, 322-328.

20. Flinders, K.T., Flynn, P.F. and Yu, Y.B. (2004) The Effect of a Side Chain-Backbone Swap on Protein Stability. J. Peptide Res.63, 17-22.

19. Babu, C.R., Flynn, P.F. and Wand, A.J. (2003) Preparation, Characterization, and NMR Spectroscopy of Encapsulated Proteins Dissolved in Low Viscosity Fluids. J. Biomol. NMR25, 313-323.

18. Flynn, P.F., Wendt, A., and Gollnick, P.G. (2002) The influence of Induced Fit in the Interaction of B. Subtilis trp RNA-Binding Attenuator Protein and its RNA Antiterminator Target Oligomer. Proteins, 49, 432-438.

17. Flynn, P.F., Milton, M.J., Babu, C.R. and Wand, A.J. (2002) A Simple and Effective NMR Cell for Studies of Encapsulated Proteins Dissolved in Low Viscosity Solvents. J. Biomol. NMR, 23, 311-316

16. Liu, W., Flynn, P.F., Fuentes, E.J., Kranz, J.K., McCormick, M. and Wand, A.J. (2001) Main Chain and Side Chain Dynamics of Oxidized Flavodoxin from C. Anabaena. Biochemistry40, 14744-14753.

15. Flynn, P.F., Bieber Urbauer, R., Zhang, H., Lee, A.L. and Wand, A.J. (2001) Main Chain and Side Chain Dynamics of a Heme Protein: 15N and 2H NMR Relaxation Studies of R.capsulatus Ferrocytochrome c2. Biochemistry40, 6559-6569.

14. Babu, C., Flynn, P.F. and Wand, A.J. (2001) Validation of Protein Structure from Preparations of Encapsulated Proteins Dissolved in Low Viscosity Fluids. J. Am. Chem. Soc.123, 2691-2692.

13. Flynn, P.F., Mattiello, D.B., Hill, H. D.W., and Wand, A.J. (2000) Optimal Use of Cryogenic Probe Technology in NMR Studies of Proteins. J. Am. Chem. Soc.122, 4823-4824.

12. Lee, A.L., Flynn, P.F. and Wand, A.J. (1999) Comparison of 2H and 13C NMR Relaxation Techniques for the Study of Protein Methyl Group Dynamics in Solution. J. Am. Chem. Soc., 121, 2891-2902.

11. Ehrhardt, M.R., Flynn, P.F. and Wand, A.J. (1999) Preparation of Encapsulated Proteins Dissolved in Low Viscosity Fluids. J. Biomol. NMR14, 75-78.

10. Wand, A.J., Ehrhardt, M.R., and Flynn, P.F. (1998) High-resolution NMR of Encapsulated Proteins Dissolved in Low-Viscosity Fluids. Proc. Natl. Acad. Sci., 95, 15299-15302.

9. Urbauer, J. L., Ehrhardt, M. R., Bieber, R. J., Flynn, P. F., and Wand, A. J. (1996) High-Resolution Triple-Resonance NMR Spectroscopy of a Novel Calmodulin-Peptide Complex at Kilobar Pressures. J. Am. Chem. Soc.118, 11329-11330.

8. Nuutero, S., Fujimoto, B.S., Flynn, P.F., Reid, B.R., Ribeiro, N.S., and Schurr, J.M. (1994) The amplitude of local angular motion of purines in DNA in solution. Biopolymers34, 463-480

7. Wang, A.C., Kim, S.G., Flynn, P.F., Sletten, E., and Reid, B.R. (1992) Considerations in the Application of Orientation-Dependent Analysis of NOE Intensities to DNA Oligonucleotides. J. Magn. Reson.100, 358-366.

6. Wang, A.C., Kim, S.G., Flynn, P.F., Chou, S.H., Orban, J., and Reid, B.R. (1992) Errors in RNA NOESY Distance Measurements in Chimeric and Hybrid Duplexes: Differences in RNA and DNA Proton Relaxation. Biochemistry31, 3940-3946.

5. Chou, S.H., Flynn, P.F., Wang, A., and Reid, B.R. (1991) High Resolution NMR Studies of Chimeric DNA--RNA-DNA Duplexes Heteronomous Base Pairing and Continuous Base Stacking at Junctions. Biochemistry30, 5248-5257.

4. Chou, S.H., Flynn, P.F., and Reid, B.R. (1989) High-Resolution NMR Studies of a Synthetic DNA-RNA Hybrid Dodecamer Containing the Concensus Pribnow Promoter Sequence: d(CGTTATAATGCG)•(CGCAUUAUAACG). Biochemistry28, 2435-2443.

3. Chou, S.H., Flynn, P.F., and Reid, B.R. (1989) Solid-Phase Synthesis and High-Resolution NMR Studies of Two Synthetic Double-Helical RNA Dodecamers: r(CGCGAAUUCGCG) and r(CGCGUAUACGCG). Biochemistry28, 2422-2435.

2. Benight, A.S., Schurr, J.M., Flynn P.F., Reid, B.R., and Wemmer, D.E. (1988) Melting of a Self-Complimentary DNA Minicircle: Comparison of Optical Melting Theory with Exchange Broadening of the Nuclear Magnetic Resonance Spectrum. J. Mol. Biol.200, 377-399.

1. Flynn, P.F., Kintanar, A., Reid, B.R., and Drobny G. (1988) Coherence Transfer in Deoxyribose Sugars Produced by Isotropic Mixing: An Improved Intraresidue Assignment Strategy for the Two-Dimensional NMR Spectra of DNA. Biochemistry27, 1191-1197.