Publications - Department of Chemistry

Fleming, A. M., Guerra Castañaza Jenkins, B. L., *Buck, B. A., *Burrows, C. J. DNA damage accelerates G-quadruplex folding in a duplex-G-quadruplex-duplex context, JACS, 2024, 146 (16), 11364-11370.
Keyes, E. D., Mifflin, M. C., Austin, M.J., Austin, M. J., Alvey, B. J., Lovely, L. H., Smith, A., Rose, T.E., Buck-Koehntop, B. A., Motwani, J., Roberts, A. G. Chemoselective, oxidation-induced macrocyclization of tyrosine-containing peptides, JACS, 2023, 145 (18), 10071-10081.
Sanchez, A., *Buck-Koehntop, B. A., *Miller, K. A. Joining the PARty: PARP Regulation of KDM5A during DNA Repair (and Transcription?), BioEssays, 2022, 44(7), 2200015.
Kumbhar, R., Sanchez, A., Perren, J., Gong, F., Corujo, D., Medina, F., Devanathan, S. K., Xhemalce, B., Matouschek, A., Buschbeck, M., Buck-Koehntop, B. A., Miller, K. M. Poly(ADP-ribose)-binding and macroH2A mediate recruitment and functions of KDM5A at DNA lesions, J. Cell. Biol., 2021, 220 (7), e202006149.
Hodges, A. J., Hudson, N. O., Buck-Koehntop, B. A. Cys₂His₂ zinc finger methyl-CpG binding proteins: Getting a handle on methylated DNA. J. Mol. Biol., 2019, doi:10.1016/j.jmb.2019.09.012.
Hudson, N. O., Whitby, F. G., Buck-Koehntop, B. A. Structural insights into methylated DNA recognition by the C-terminal zinc fingers of the DNA reader protein ZBTB38, J. Biol. Chem., 2018, 293, 19835-19843.
Hudson, N. O., Buck-Koehntop, B. A. Zinc Finger Readers of Methylated DNA, Molecules, 2018, 23 (10), 2555.
Wang, S., Al-Soodani, A. T., Thomas, G. C., Buck-Koehntop, B. A., Woycechowsky, K. J. A Protein-Capsid-Based System for Cell Delivery of Selenocysteine. Bioconjugate Chem., 2018, 29 (7), 2332-2342.
Pozner, A., Hudson, N. O., Trewhella, J., Terooatea, T. W., Miller, S. A., Buck-Koehntop, B. A. The C-terminal Zinc Fingers of ZBTB38 are Novel Selective Readers of DNA Methylation, J. Mol. Biol., 2018, 430 (3), 258-271 (https://doi.org/10.1016/j.jmb.2017.12.014).
Pozner, A.; Terooatea, T. W.; Buck-Koehntop, B. A. Cell Specific Kaiso (ZBTB33) Regulation of Cell Cycle Through cyclin D1 and cyclin E1, J. Biol. Chem., 2016, 291 (47), 24538-24550.
Terooatea, T. W.; Pozner, A.; Buck-Koehntop, B. A. PAtCh-Cap: input strategy for improving analysis of ChIP-exo data sets and beyond. Nucleic Acids Res., 2016, 44 (21), e159.
Buck-Koehntop, B. A., Defossez, P.-A. 2013. On how Mammalian Transcription Factors Recognize Methylated DNA. Epigenetics 8(2), 131-137.
Buck-Koehntop, B. A., Stanfield, R. L., Ekiert, D. C., Martinez-Yamout, M. A., Dyson, H. J., Wilson, I. A., Wright, P. E. 2012. Molecular Basis for Recognition of Methylated and Specific DNA Sequences by the Zinc Finger Protein Kaiso. Proc. Nat. Acad. Sci. USA 109, 15229-15234.
Buck-Koehntop, B. A., Martinez-Yamout, M. A., Dyson, H. J., Wright, P. E. 2012. Kaiso uses all Three Zinc Fingers and Adjacent Sequence Motifs for High Affinity Binding to Sequence-specific and Methyl-CpG DNA Targets. FEBS Lett. 586, 734-739.
Porcelli, F., Triggiani, D., Buck-Koehntop, B. A., Masterson, L. R., Veglia, G. 2009.Pseudoenzymatic Dealkylation of Alkyltins by Biological Dithiols. J. Biol. Inorg. Chem. 14, 1219-1225.
Lee, B. M., Buck-Koehntop, B. A., Martinez-Yamout, M. A., Dyson, H. J., Wright, P. E. 2007. Embryonic Neural Inducing Factor Churchill Is not a DNA-binding Zinc Finger Protein: Solution Structure Reveals a Solvent-exposed ?-Sheet and Zinc Binuclear Cluster. J. Mol. Biol. 371, 1274-1289.
Porcelli, F., Buck-Koehntop, B. A., Thennarasu, S., Ramamoorthy, A., Veglia, G. 2006. Structures of the Dimeric and Monomeric Variants of Magainin Antimicrobial Peptides (MSI-78 and MSI-594) in Micelles and Bilayers, Determined by NMR Spectroscopy. Biochemistry 45, 5793-5799.
Buffy, J. J., Buck-Koehntop, B. A., Porcelli, F., Traaseth, N. J., Thomas, D. D., Veglia, G. 2006. Defining the Intramembrane Binding Mechanism of Sarcolipin to Calcium ATPase Using Solution NMR Spectroscopy. J. Mol. Biol. 358, 420-429.
Buck-Koehntop, B. A., Porcelli, F., Lewin, J. L., Cramer, C. J., Veglia, G. 2006. Biological Chemistry of Organotin Compounds: Interactions and Dealkylation by Dithiols. J. Organomet. Chem. 691, 1748-1755.
Billingsley, M. L., Yun, J., Reese, B. E., Davidson, C. E., Buck-Koehntop, B. A., Veglia, G. 2006. Functional and Structural Properties of Stannin: Roles in Cellular Growth, Selective Toxicity, and Mitochondrial Responses to Injury. J. Cell. Biochem. 98, 243-250.
Buck-Koehntop, B. A., Mascioni, A., Buffy, J. J., Veglia, G. 2005. Structure, Dynamics, and Membrane Topology of Stannin: A Mediator of Neuronal Cell Apoptosis Induced by Trimethyltin Chloride. J. Mol. Biol. 354, 652-665.
Porcelli, F., Buck, B., Lee D. K., Hallock, K. J., Ramamoorthy, A., Veglia, G. 2004. Structure and Orientation of Pardaxin Determined by NMR Experiments in Model Membranes. J. Biol. Chem. 279, 45815-45823.
Buck, B. A., Mascioni, A., Cramer, C. J., Veglia, G. 2004. Interactions of Alkyltin Salts with Biological Dithiols: Dealkylation and Induction of a Regular ?-Turn Structure. J. Am. Chem. Soc. 126, 14400-14410.
Buck, B., Mascioni, A., Que, L. Jr., Veglia, G. 2003. Dealkylation of Organotin Compounds by Biological Dithiols: Toward the Chemistry of Organotin Toxicity. J. Am. Chem. Soc. 125, 13316-13317. (Highlighted in C&E News as a Scientific Concentrate: Nov. 10, 2003. Alkyltins target brain protein dithiol. 81, 44).
Buck, B., Zamoon, J., Desilva, T. M., Karim, C., Kirby, T. L., Thomas, D., Veglia, G. 2003. Overexpression, Purification and Characterization of Recombinant Ca-ATPase Regulators for High Resolution Solution and Solid-State NMR Studies. Protein Expr. Purif. 30, 253-261.

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